marc@mdeller:~$ whoami
Marc C. Deller, D.Phil.
— Structural biologist working in drug discovery. This is where the tools I build end up: small web apps for people who work with protein structures. Free, no sign-up, nothing to install.main site → marcdeller.com "Hidden Architecture: Mapping Biology’s Structure"
marc@mdeller:~$
ls -la apps/
# 6 live, 0 building- ●FlexAppeal # Set up protein molecular dynamics without writing the script: every OpenMM option explained, a self-contained bundle to run on your own machine, and interactive trajectory analysis github.com/bellcheddar/FlexAppeal
- ●AlphaFraud # Catch AlphaFold where the fold is wrong: weekly, automatically, on freshly deposited human structures github.com/bellcheddar/AlphaFraud
- ●BoltzMaker # Build and analyze Boltz-2 protein structure prediction campaigns: a guided input wizard, YAML generation, and full result analysis with confidence/affinity dashboards -- no GPU required github.com/bellcheddar/BoltzMaker
- ●ChatPDB # A protein-structure-literate AI assistant for analyzing proteins: RAG for facts, a QLoRA-tuned model for behaviour, and live Biopython/gemmi/DSSP/PyMOL tool calls for structural truth. github.com/bellcheddar/chatPDB
- ●ChemSage # A hybrid, chemically aware LLM for drug discovery: RAG for facts, a QLoRA-tuned model for behavior, and live RDKit/PyMOL tool calls for chemical truth github.com/bellcheddar/ChemSage
- ●MicroPlastics Blaster # A browser-based arcade game by Elora Therapeutics — the biotech developing first-in-class enzyme therapy to remove microplastics from the human body. Fire enzymatic blasts at incoming polymer particles, protect the cell, and climb the global leaderboard github.com/bellcheddar/microplastic-blaster
marc@mdeller:~$ top -bn1 | head
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marc@mdeller:~$ cat links.txt
blog structural-biology publications structures projects patents vibe-coding about-me